rs29388363 SNP Detail

Summary

• ID
  rs29388363
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:82328741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCTCTGGAG AGACCCAGCT CCCATAGGGA AAAGCCACCT
  GGGGAGGAAT ATGGGAGGTT TGTTCAAAGA GGCAGTGGAT GTAGGCAATA CCTTGCACTA
  S
  AAGGCTGGTG GATGTCTGTG ACCCACCCTG ACTGCTGTGA CCGGCCAGGA GTATGTGCCG
  ATGTCACTCT GAGAGCTCTG GTTTAGGGGA AGGGATGGT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38668549	mCV23446967	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss132455730	ENSMUSSNP3127999	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		G
ss323765041	CHEV_11_82251417	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29388363					SNP	C	C	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:82328741 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm141	DNA segment, Chr 11, Boehm 141	411 bp distal
D11Pas13	DNA segment, Chr 11, Pasteur Institute 13	204 bp distal
D11Pas23	DNA segment, Chr 11, Pasteur Institute 23	573 bp distal
D11Pas49	DNA segment, Chr 11, Pasteur Institute 49	1473 bp distal
Tmem132e	transmembrane protein 132E	within coordinates