rs29388995 SNP Detail

Summary

• ID
  rs29388995
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67575171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCC CCCCCGCCCC TCAACACTGT
  Y
  GCACCCTTGA CCAGCACTCC TCTGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38671967	mCV24738338	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss132331018	ENSMUSSNP2428769	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss323721083	CHEV_11_67497847	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29388995					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67575171 () rs orientation: forward

Symbol	Name	Function Class
Gas7	growth arrest specific 7	within coordinates
Glp2r	glucagon-like peptide 2 receptor	within coordinates
Tssr102273	transcription start site region 102273	1810 bp downstream
Tssr102274	transcription start site region 102274	814 bp downstream
Tssr102275	transcription start site region 102275	436 bp downstream
Tssr102276	transcription start site region 102276	122 bp downstream
Tssr102277	transcription start site region 102277	267 bp upstream
Tssr102278	transcription start site region 102278	330 bp upstream
Tssr102279	transcription start site region 102279	704 bp upstream