rs29390381 SNP Detail

Summary

• ID
  rs29390381
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:28694487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGGAACAAT AGGATACCTC ATTCACTGCT AGTTGGAAGG
  CAAAATACTA CTTATAAGAG AATATGCCAG GGTCTTTCAA TGTTATATAT AGAGTCACTA
  Y
  AGAACTCATA AGTCAGGCTC TGATATTAGC CAGAGGAGGT GGCAATGTGG TCACACAGAA
  ACTCAAGCTC AATTGTTCAT ACTCCCTAGA CATAATCAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38673997	mCV23802661	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss131881201	ENSMUSSNP1287172	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29390381					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:28694487 () rs orientation: forward

Symbol	Name	Function Class
Mir216b	microRNA 216b	1704 bp upstream
Mir216c	microRNA 216c	1711 bp downstream
Mir217hg	microRNA 217 host gene	within coordinates