rs29392397 SNP Detail

Summary

• ID
  rs29392397
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57396029 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGC CTGCGACAGA GTGCACAGGG
  R
  ACGCCCACTG GCTGCAGACC CCTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38679366	mCV23214486	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss132170423	ENSMUSSNP6340464	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss323682965	CHEV_11_57318705	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29392397					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57396029 () rs orientation: forward

Symbol	Name	Function Class
Fam114a2	family with sequence similarity 114, member A2	within coordinates
Tssr108113	transcription start site region 108113	1838 bp downstream
Tssr108114	transcription start site region 108114	1899 bp downstream
Tssr108115	transcription start site region 108115	1907 bp downstream
Tssr108116	transcription start site region 108116	1926 bp downstream