rs29393146 SNP Detail

Summary

• ID
  rs29393146
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73481785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTTTTCA TCAATGCTGG
  AGTTAGGACT CTTTATCATT TTAGAGTTGC TCCTCCTCTG ACCTATTATT TCCCCTCCTC
  ACTTTCCCTT CATCTGGTTC ATCCTCACTT ATATGTCAGC GATATTGATT ATCATATACT
  CAACTGCATT TACTGTCCTC ACATACTTAC TGAGATGTTC AGCCATGCTC CCTATCATCC
  W
  ATACATATCA TTCCATGCTC TTAATATTTG ATCACTACTT TACTATATAT TCCCATCGAT
  TGTAAACTTT ATGCAGGAAA TGTCATATAT GCCTTCATTT TGTTTGGTTG TTTACATTCT
  CAGTTACCAA CTAGAACAAA AACTGTCATG ATGCATAAAT ATGGCCATTG AATATTTGTT
  ATGTGCTGCT CAAACTGATG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38681196	mCV25082559	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss132425554	ENSMUSSNP7012548	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
ss323746749	CHEV_11_73404461	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29393146					SNP	T	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73481785 () rs orientation: forward

Symbol	Name	Function Class
Or1e26	olfactory receptor family 1 subfamily E member 26	1223 bp upstream