rs29399576 SNP Detail

Summary

• ID
  rs29399576
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:8062115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT ATTACTTTGA AAAGTATGTG
  Y
  TCTCTTGATA CAACTGAAAA CATGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38698822	mCV23835182	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss131658571	ENSMUSSNP1173090	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		C
ss323552171	CHEV_11_8012118	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29399576					SNP	C	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:8062115 () rs orientation: forward

Symbol	Name	Function Class
Gm11988	predicted gene 11988	248 bp downstream