rs29403514 SNP Detail

Summary

• ID
  rs29403514
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:9822782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGATCCCAA GAAACAAGCT
  GGAGCAGCCA TTCCAATATT GAATAAAATC GACTTTCAAC CTAAAGTTAT CAAAAAAGAT
  AAGAAGGGAC ACTTCATACA CATCAAAGGT AAAATTTACC AATATGAACT CTCAATTCTG
  AACATCTATG CTCCAAATGC AAGGGCATCT ATACTCACTA AAGAAACTCA ACAGCTCAAA
  R
  CACACATTGT ACCACATATA ATAATAGTGG GAGACAGTCA ACACTCCACC CTCTTCAATG
  GACAGATCCT GGGAACAGAG ACACAGTGAA ACTAACAGAA GTTATAAAGC AAATATATTT
  AAGAGATATC TATAGAATAT TTTTTTCCTA AAACAAAAGG ATATACCTTC TTCTCTGCAC
  CTCATGGTGC CTTCTCTAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38707524	mCV22917845	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss131676063	ENSMUSSNP6742376	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss323558257	CHEV_11_9772785	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29403514					SNP	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:9822782 () rs orientation: forward

Symbol	Name	Function Class
Tssr106858	transcription start site region 106858	955 bp downstream
Tssr106859	transcription start site region 106859	1026 bp downstream