rs29405596 SNP Detail

Summary

• ID
  rs29405596
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:95719279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAA TAGTCTGATG GGATCAGTAG
  S
  GAAAGGGAAG CCAGTGGGCA GGCAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38718318	mCV23213182	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	C
ss132668204	ENSMUSSNP5873567	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29405596					SNP	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:95719279 () rs orientation: forward

Symbol	Name	Function Class
Abi3	ABI family member 3	1621 bp downstream
Cpgi3603	CpG island 3603	1758 bp proximal
Phospho1	phosphatase, orphan 1	within coordinates
Rr455199	regulatory region 455199	1796 bp distal
Rr455200	regulatory region 455200	within coordinates
Rr455201	regulatory region 455201	746 bp distal