rs29405774 SNP Detail

Summary

• ID
  rs29405774
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71638754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGC TGTGTCCGGT GCTGCTTTGC
  R
  TACACACATA TTGGTCCAGA TTGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss38716524	mCV23438337	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss132393464	ENSMUSSNP3048366	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss323743700	CHEV_11_71561430	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29405774					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71638754 () rs orientation: forward

Symbol	Name	Function Class
Rr236016	regulatory region 236016	1647 bp proximal
Rr241547	regulatory region 241547	within coordinates
Rr244944	regulatory region 244944	1687 bp distal
Rr247127	regulatory region 247127	1846 bp proximal
Tssr102813	transcription start site region 102813	1986 bp upstream
Wscd1	WSC domain containing 1	1992 bp upstream