rs29408321 SNP Detail

Summary

• ID
  rs29408321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:11507127 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTC AAGTCGTCTC TGAGTGCTGC
  R
  ATGTCTAAGC TAGAATGATA AGTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss38720301	mCV24438522	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss131686833	ENSMUSSNP7071726	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss323561264	CHEV_11_11457130	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29408321					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:11507127 () rs orientation: forward

Symbol	Name	Function Class
Gm11998	predicted gene 11998	283 bp upstream
Gm29945	predicted gene, 29945	within coordinates
Rr402417	regulatory region 402417	57 bp upstream
Tssr100349	transcription start site region 100349	261 bp upstream
Tssr100350	transcription start site region 100350	274 bp upstream
Tssr100351	transcription start site region 100351	805 bp upstream
Tssr100352	transcription start site region 100352	880 bp upstream