rs29410525 SNP Detail

Summary

• ID
  rs29410525
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67143820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAGG AAAGAGTTTG AAATGAGCAA
  Y
  CTGCAGAGCA AGATTGAGGA CGAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss38726315	mCV22577875	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss132326579	ENSMUSSNP4459588	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs29410525					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67143820 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Tssr3528	transcription start site region 3528	1739 bp upstream
Tssr3529	transcription start site region 3529	1795 bp upstream
Tssr102199	transcription start site region 102199	1259 bp downstream
Tssr102200	transcription start site region 102200	1108 bp downstream
Tssr102201	transcription start site region 102201	481 bp upstream
Tssr102202	transcription start site region 102202	1003 bp upstream
Tssr102203	transcription start site region 102203	1063 bp upstream
Tssr102204	transcription start site region 102204	1461 bp upstream
Tssr102205	transcription start site region 102205	1679 bp upstream
Tssr102206	transcription start site region 102206	1783 bp upstream
Tssr108532	transcription start site region 108532	1236 bp upstream
Tssr108533	transcription start site region 108533	1084 bp upstream
Tssr108534	transcription start site region 108534	390 bp upstream
Tssr108535	transcription start site region 108535	284 bp upstream
Tssr108536	transcription start site region 108536	1050 bp downstream
Tssr108537	transcription start site region 108537	1062 bp downstream
Tssr108538	transcription start site region 108538	1564 bp downstream
Tssr108539	transcription start site region 108539	1772 bp downstream
Tssr108540	transcription start site region 108540	1832 bp downstream