rs29410624 SNP Detail

Summary

• ID
  rs29410624
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74594975 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTTGCTT TAACTTCATA
  AGTCATTTTG AACCTCTGAC AGTTTTAAAG AAACTAAGAA TTGTTAGGAC TTTATTATAG
  ACAGCTCCTC AGCCCAGAAA ATAAAACCTC AGATGCCGTT TTTGTGATAC ATGTCTATAG
  TCAGAGAAAG TATTTTTAAA AAAAGAAGAC AAATACTTAT TTTAAGGTCA CATTTTTTTT
  W
  AATTTACTTT AGTGTTAGTC TACACTTACA TAACTGCAAA CGCATAGCTA GGCATTGCAA
  AGTTCATGTA CAGGCACGCT TGGCACACTG CTTTAAACAC TCTGGAATAT GAAGACATGC
  TATTTCCTAA TAAAGTTTCC CAGTAAGTAT ACTCTATTCT ACTAAATCCA CAACTTTTCA
  AGTTTTTGAA ATTTTATGTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38726369	mCV23961969	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29410624					SNP	A	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74594975 () rs orientation: forward

Symbol	Name	Function Class
Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	within coordinates
Rr386282	regulatory region 386282	1839 bp upstream
Tssr109134	transcription start site region 109134	1468 bp downstream