rs29411542 SNP Detail

Summary

• ID
  rs29411542
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73123282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGAGAGGA TGACGACAAG
  AGATCGTATC TGACTAGAGG ACCAGAAGAA GGAGAGTCCT TTTACAGTCA GGGGACAGCC
  AGTCATGGAT GCTTAATTCA GACAGAACAG AGGTGGCACT GAGACCAGCT GAGAGAAGGA
  TTTGCTGTCC CTAGGTACAG GTTCAGGGAG GTAGAGATGG ACCTCAGAGA GATACAAGGT
  Y
  TGGGGGGTTG TTTAAGAAAG ACAGTTCAGT TTGGGAGGTG AAAAAGCTCT GGAGAGTTGG
  TGATAGCAGA TGCCAATAAT GTGAACGAAC TGAAGGCCAC CCAACTGTGC ATTTGAAGTG
  TTTAGGATAA TGAAGTTTAG ACTCCCTATG TCTTACCACA ATCTAAAAAA AACAAGAACA
  AGCCCTTGGT ATCCTAGGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss38729943	mCV25414645	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss132423007	ENSMUSSNP6528341	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs29411542					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73123282 () rs orientation: forward

Symbol	Name	Function Class
Trpv1	transient receptor potential cation channel, subfamily V, member 1	1836 bp upstream