rs29411836 SNP Detail

Summary

• ID
  rs29411836
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83337844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGC CAGATTCGGA AGGCCAGTGC
  R
  GAGCAGAATG GGAGAATGGC TCACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38730081	mCV22342770	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss132469359	ENSMUSSNP3650333	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323767186	CHEV_11_83260520	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29411836					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83337844 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3416	CpG island 3416	1697 bp distal
Mmp28	matrix metallopeptidase 28 (epilysin)	within coordinates
Rr452961	regulatory region 452961	1776 bp distal
Rr452962	regulatory region 452962	589 bp proximal