rs29412026 SNP Detail

Summary

• ID
  rs29412026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73123848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTCAGGG TTGTTACTGG
  GCCTAGAGGT GGGTGTGGAG AAGCTCTTTG GTACCCCTTC TGCAGGGTGG CTGGGAGTTA
  CTGTGCTCTG ATGACTCCAC TCTGGTCCCA GCTTTGTACT ACTCCAGGAG GAGCTGCAGT
  GGCTGGTCTG AGCTCCATCC AGGCTGTGTC TGAACCATGA CTTGTTAAAG AAATAAAAAG
  R
  AAAGAAAAGG ACATGGCCAC TCCTAGGTAT GGTGGAGGAG AACGTTTATT GTAGATAAAG
  GGCAAGCATA GCCAGAGGCA GACATGTCTG GGAGAGTCCA GAGTGGTTGT GTCCCTGAGC
  CATGTGGGGA GGTGGGGTGG GGGCTCGCAG AGAGGGAGGG AGAGAGGAGA GAGGGGAACC
  AGATGCAGCA GCCAGGAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss38730947	mCV25414446	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss132423027	ENSMUSSNP5597676	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs29412026					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73123848 () rs orientation: forward

Symbol	Name	Function Class
Trpv1	transient receptor potential cation channel, subfamily V, member 1	1270 bp upstream