rs29412747 SNP Detail

Summary

• ID
  rs29412747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:84070435 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATAGCTTC CACTCCGCTC
  TCTGCCGGGA GGTGGAGCCG TTGGGCCGGC CCCAAACCCG CCCAGACAGA AGGGGAACCC
  ACCACGTCCC AGACCCGCCC GCCCTCGCAC CGCTCGGCCC CGAATGGCAG AGCCGCACTC
  GGACCATCGG CATCGCCTCA CGTCGCCCCG CCCCGCGCCG CGCGCCCATT GGCTGACGCG
  R
  GCCCGAGCCC GCGCCTCGCC CCCTCCCACT GGCGCCCAGA CCGCGCGGCT GCCCGGAGCG
  GGGTCGGAGG TGAACGGCCT GGAGTAACCC CGGACGCGCG CGGACCTAAT GGGGCTGGGC
  GGCTGAGGTG GGCGGCCGGG CGGGGGCGGG CCGGGGGCGG GGCAGTCCAC CGAAGCCCCG
  CCCTCCTCGG CCCCGGTGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss38732144	mCV24638961	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss132477379	ENSMUSSNP3357015	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29412747					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:84070435 () rs orientation: forward

Symbol	Name	Function Class
Acaca	acetyl-Coenzyme A carboxylase alpha	within coordinates
Cpgi3430	CpG island 3430	within coordinates
Tssr103797	transcription start site region 103797	1956 bp downstream
Tssr103798	transcription start site region 103798	2 bp upstream
Tssr103799	transcription start site region 103799	49 bp upstream
Tssr103800	transcription start site region 103800	183 bp upstream
Tssr103801	transcription start site region 103801	243 bp upstream
Tssr103802	transcription start site region 103802	257 bp upstream
Tssr103803	transcription start site region 103803	700 bp upstream