rs29413489 SNP Detail

Summary

• ID
  rs29413489
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:5744130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTGGAATT CACCCTCCCA
  TTCATTTCTG CAGGATGTGG GGGAGGGGTC CGGAGTGTGT GAGAACTGTT CCCACGAGGG
  AAGCCAGCAA CCATACTTCT CAGAGAACAC CCTGAGCTCC TTGGGAAGTA CAAGGACCGA
  TCTCATCTAT GTGACTTATT TGGGAGAATG GCTTTGGCTT TGGTGTGGAA TGGGGACTAG
  R
  GAGTATCACT TAGGAGAAAG AGGGAACTGT TGGGTTCCTG GGAAATATGG GCCAGGAAGT
  GGCTTTGGAG GAGGCCTAGT TCACGCAGTT TGTGCTTGTG TTGCAGACAG GAGAGGGTGT
  GAATGATGTG CGGAAAGGAG CATGTGCCAA CCACGTCAGC ACCATGGCCA ACTTCCTGAA
  GGTAGGTGCT GAACCAAGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38734519	mCV22516775	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss131639669	ENSMUSSNP2259763	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
ss323549089	CHEV_11_5694133	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29413489					SNP	G	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:5744130 () rs orientation: forward

Symbol	Name	Function Class
Dbnl	drebrin-like	within coordinates
Rr250570	regulatory region 250570	within coordinates
Rr250571	regulatory region 250571	1072 bp proximal
Tssr100199	transcription start site region 100199	404 bp downstream