rs29413866 SNP Detail

Summary

• ID
  rs29413866
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88533138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACATG ATCAGTGATC CTCCAAAGAC
  R
  GCTTATTAGC TCTTTAAAAA AAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38736414	mCV24868904	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss132538440	ENSMUSSNP5910995	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss323780621	CHEV_11_88503626	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29413866					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88533138 () rs orientation: forward

Symbol	Name	Function Class
Msi2	musashi RNA-binding protein 2	within coordinates
Rr242301	regulatory region 242301	938 bp distal
Rr252316	regulatory region 252316	1464 bp proximal
Tssr110026	transcription start site region 110026	1236 bp downstream