rs29415899 SNP Detail

Summary

• ID
  rs29415899
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74595901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGATTAGA ATTGTTCATC AGAATCACCT AAGAAACTCT
  GAAAACAATA GCTAGGCCTC ATTCTCAAAA ATTCAGAAGC ACATATATTT TAATTTTATT
  Y
  AACAGATAAA ACGTAATCCA TATGACTTTG ATGCACACCC CCAATAAAGA GCCAGACAGT
  AGTGCACACC TTTAATCCCA GCACTCAAAA GACAGAAGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss38741523	mCV23961993	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss323749416	CHEV_11_74518577	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs29415899					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74595901 () rs orientation: forward

Symbol	Name	Function Class
Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	within coordinates
Rr386282	regulatory region 386282	913 bp upstream
Tssr109134	transcription start site region 109134	542 bp downstream