rs29416035 SNP Detail

Summary

• ID
  rs29416035
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:29479070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGCAAGAG TACTCATGTA AAATAAACAA GTAAATAAAT
  TTTAAAAAAT GATTAAGGTA AATTCAGTGC AATACTCCAT AATTTTCATT CTTTTTAACA
  Y
  TCAAGAATAA TGCTTAGTGT TATAAAACAA CAATGTATCC TCTAATGAAA TTTTTTAAAA
  CACAATGTAG GGGGATAAAG AGTACTGGCT GCTCTTCCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38736590	mCV25278910	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss131896000	ENSMUSSNP4678717	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss323610916	CHEV_11_29429070	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29416035					SNP	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:29479070 () rs orientation: forward

Symbol	Name	Function Class
Mtif2	mitochondrial translational initiation factor 2	within coordinates
Rr444175	regulatory region 444175	1925 bp distal
Rr444176	regulatory region 444176	107 bp distal