rs29421376 SNP Detail

Summary

• ID
  rs29421376
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:4089731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCA GTGCCCTGAC ATCTGCCTCC
  Y
  TTCGCAGAAG CCCCTGCAGC AGCTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss38754109	mCV22810356	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss131630999	ENSMUSSNP4769037	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29421376					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:4089731 () rs orientation: forward

Symbol	Name	Function Class
Ccdc157	coiled-coil domain containing 157	1392 bp downstream
Mir3060	microRNA 3060	285 bp downstream
Rnf215	ring finger protein 215	within coordinates
Rr240236	regulatory region 240236	within coordinates