rs29424188 SNP Detail

Summary

• ID
  rs29424188
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:44590280 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAG GCACTGAGCT GAATGTAGAG
  R
  GACTCCTGCT GGTATCAGAC TCTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38758136	mCV24312831	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss132083711	ENSMUSSNP1736527	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss323654687	CHEV_11_44512955	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29424188					SNP	G	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:44590280 () rs orientation: forward

Symbol	Name	Function Class
Ebf1	early B cell factor 1	Intron
Rr445670	regulatory region 445670	1936 bp distal
Rr445671	regulatory region 445671	793 bp proximal
Tssr101056	transcription start site region 101056	424 bp downstream