rs29425040 SNP Detail

Summary

• ID
  rs29425040
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73482247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATCACTAA ATTTTAAACT
  ATGTTGATTA TTAGACTTCT AATGTTGCAC TTCTGCAGTG TTGGGGTTAA CCATTTCTAT
  CATTCCTCAG TAATACTGAC AACTATAAAT CATATGCATA TGGTTTAATC CACAAAATAT
  CATTGAGATT GGTGGAGAAC ACATTCAGAT GAAAAATTTT ATTAATTATA AGGAAAGAGG
  Y
  AACAAATTGC TTTGGAATTT TCACTTGGGT TATTCTTCAG ATAACTATGT TGTATGTGAT
  TGTGAATTTA TACATCAAGT GGACTTATCC CTGATACCCA TTTGGAAAAA TCATAGTTGC
  TATGCAAATA TTCTCTAAAT GTCATTACAA TCTCTAGACT TTAAGTAAAG TAACTAACGC
  TTCATCACAG CTTATGCATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38765595	mCV25082557	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss132425561	ENSMUSSNP1166601	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		C
ss323746751	CHEV_11_73404923	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29425040					SNP	C	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73482247 () rs orientation: forward

Symbol	Name	Function Class
Or1e26	olfactory receptor family 1 subfamily E member 26	1685 bp upstream