rs29430562 SNP Detail

Summary

• ID
  rs29430562
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:58886323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTG CAGGATGTGT TGGGCATGCA
  R
  GTACTGGGTG GCACTCAGCA TCTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38782638	mCV23838170	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss132221099	ENSMUSSNP4448535	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29430562					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58886323 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2948	CpG island 2948	693 bp distal
Gm74293	predicted gene, 74293	within coordinates
Obscn	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	Coding-Synonymous
Rr448070	regulatory region 448070	521 bp proximal