rs29432412 SNP Detail

Summary

• ID
  rs29432412
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69490583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAT GATATACATT TATATATATA
  M
  TCGCTCTCAG TTTATTGTAC TTTAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss38783508	mCV23357628	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss132359128	ENSMUSSNP4447523	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
ss323730634	CHEV_11_69413259	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29432412					SNP	A	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69490583 () rs orientation: forward

Symbol	Name	Function Class
Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide	within coordinates
Gm72066	predicted gene, 72066	within coordinates
Rr386229	regulatory region 386229	within coordinates
Rr450033	regulatory region 450033	18 bp distal
Rr450034	regulatory region 450034	147 bp distal
Rr450035	regulatory region 450035	284 bp proximal
Tssr3544	transcription start site region 3544	938 bp downstream
Tssr102487	transcription start site region 102487	256 bp upstream
Tssr102488	transcription start site region 102488	1406 bp upstream
Tssr102489	transcription start site region 102489	1481 bp upstream
Tssr108712	transcription start site region 108712	250 bp downstream
Tssr108713	transcription start site region 108713	395 bp downstream
Tssr108714	transcription start site region 108714	477 bp downstream
Tssr108715	transcription start site region 108715	490 bp downstream
Tssr108716	transcription start site region 108716	802 bp downstream
Tssr108717	transcription start site region 108717	827 bp downstream
Tssr108718	transcription start site region 108718	886 bp downstream
Tssr108719	transcription start site region 108719	897 bp downstream
Tssr108720	transcription start site region 108720	901 bp downstream
Tssr108721	transcription start site region 108721	915 bp downstream
Tssr108722	transcription start site region 108722	996 bp downstream
Tssr108723	transcription start site region 108723	1024 bp downstream
Tssr108724	transcription start site region 108724	1077 bp downstream
Tssr108725	transcription start site region 108725	1101 bp downstream
Tssr108726	transcription start site region 108726	1196 bp downstream
Tssr108727	transcription start site region 108727	1218 bp downstream
Tssr108728	transcription start site region 108728	1262 bp downstream
Tssr108729	transcription start site region 108729	1349 bp downstream
Tssr108730	transcription start site region 108730	1381 bp downstream
Tssr108731	transcription start site region 108731	1412 bp downstream
Tssr108732	transcription start site region 108732	1473 bp downstream