rs29433499 SNP Detail

Summary

• ID
  rs29433499
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67143306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGA GTCCTCGTGC TATTTGTTGT
  Y
  ACTTCTGAGT TTTTTCTTGA GTATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38784176	mCV22577873	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss132326571	ENSMUSSNP1471673	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29433499					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67143306 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Rr449442	regulatory region 449442	1318 bp proximal
Tssr3527	transcription start site region 3527	1603 bp upstream
Tssr102189	transcription start site region 102189	1954 bp downstream
Tssr102190	transcription start site region 102190	1938 bp downstream
Tssr102191	transcription start site region 102191	1917 bp downstream
Tssr102192	transcription start site region 102192	1911 bp downstream
Tssr102193	transcription start site region 102193	1868 bp downstream
Tssr102194	transcription start site region 102194	1726 bp downstream
Tssr102195	transcription start site region 102195	1643 bp downstream
Tssr102196	transcription start site region 102196	1604 bp downstream
Tssr102197	transcription start site region 102197	1560 bp downstream
Tssr102198	transcription start site region 102198	1499 bp downstream
Tssr102199	transcription start site region 102199	745 bp downstream
Tssr102200	transcription start site region 102200	594 bp downstream
Tssr102201	transcription start site region 102201	995 bp upstream
Tssr102202	transcription start site region 102202	1517 bp upstream
Tssr102203	transcription start site region 102203	1577 bp upstream
Tssr102204	transcription start site region 102204	1975 bp upstream
Tssr108528	transcription start site region 108528	1836 bp upstream
Tssr108529	transcription start site region 108529	1522 bp upstream
Tssr108530	transcription start site region 108530	1520 bp upstream
Tssr108531	transcription start site region 108531	1492 bp upstream
Tssr108532	transcription start site region 108532	722 bp upstream
Tssr108533	transcription start site region 108533	570 bp upstream
Tssr108534	transcription start site region 108534	116 bp downstream
Tssr108535	transcription start site region 108535	212 bp downstream
Tssr108536	transcription start site region 108536	1564 bp downstream
Tssr108537	transcription start site region 108537	1576 bp downstream