rs29433739 SNP Detail

Summary

• ID
  rs29433739
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:113617860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTG CCTACCTGCG TAGGAGCACC
  W
  GTCAGGGGCC CAGTGAGCAC TTCAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38789828	mCV24663335	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	T
ss132843836	ENSMUSSNP6560108	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29433739					SNP	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:113617860 () rs orientation: forward

Symbol	Name	Function Class
Cdc42ep4	CDC42 effector protein 4	mRNA-UTR
Rr459435	regulatory region 459435	943 bp distal
Rr459436	regulatory region 459436	172 bp proximal