rs29435193 SNP Detail

Summary

• ID
  rs29435193
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73481838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCTGACC TATTATTTCC
  CCTCCTCACT TTCCCTTCAT CTGGTTCATC CTCACTTATA TGTCAGCGAT ATTGATTATC
  ATATACTCAA CTGCATTTAC TGTCCTCACA TACTTACTGA GATGTTCAGC CATGCTCCCT
  ATCATCCTAT ACATATCATT CCATGCTCTT AATATTTGAT CACTACTTTA CTATATATTC
  Y
  CATCGATTGT AAACTTTATG CAGGAAATGT CATATATGCC TTCATTTTGT TTGGTTGTTT
  ACATTCTCAG TTACCAACTA GAACAAAAAC TGTCATGATG CATAAATATG GCCATTGAAT
  ATTTGTTATG TGCTGCTCAA ACTGATGTAG ATTTATTTAA CTTCAAAAGT AAAAAAAAAA
  TCACATGTAC ATAGACAGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38791322	mCV25082558	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss132425558	ENSMUSSNP3586231	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
ss323746750	CHEV_11_73404514	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29435193					SNP	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73481838 () rs orientation: forward

Symbol	Name	Function Class
Or1e26	olfactory receptor family 1 subfamily E member 26	1276 bp upstream