rs29435900 SNP Detail

Summary

• ID
  rs29435900
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62372778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTTTT TTTTTTTTTT
  TTTTTTTTTT TTTTTTTGTG ACAGAGTTTC ATTGTGTAGC CCTGGCTGTC CTGGAACTCC
  CTGTGTAGAC CAGGCTTTCC CCAAACTCAG AGATCCACCT GCTTCTGCTT CCCCAAGAGC
  TGGGATTAAA GGTGTGCATC ACCACCACCC AGCTCAGCAT TGCTTCCTTA TATGAGTTAG
  R
  ACCACTTGCC CCAAGCCAGC AGGACCCACA ATGGGCTGGA CCCTCCCACA TCAATCAATA
  ATCAATAAAA TGCCCAACAG ACTTTCCTAT AGGTCAGTCT TATTGAGGCA TTTTCTCAAT
  TAAGAGTCTC TCTCCCGGGG CTGATGAGAT GTCTCAGTGG GTAAGAGCAC TGACTGCTTT
  TCCAAAGGTC CTGAGTTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38791546	mCV23968373	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss323703873	CHEV_11_62295454	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29435900					SNP	G	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62372778 () rs orientation: forward

Symbol	Name	Function Class
Gm12278	predicted gene 12278	845 bp upstream
Pigl	phosphatidylinositol glycan anchor biosynthesis, class L	within coordinates