rs29436118 SNP Detail

Summary

• ID
  rs29436118
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32199168 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGGCCCATA ATATAAGTAG TTTTGTTTTA GAGACACGGT
  CTCTCTCTCT ATATCCATGA CTGTCCAGGA GCCCAGAGAT TCACTGGCCT TTGCCTTCTA
  Y
  AGGCTAGTAT AAGAGGTGCA CGCCACCATG CCCACCTAAT TTTCCAAGGA AAATAAGTAA
  AGTTTTCACT GAAAATACAT TAGAATCAGA CAAGACTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38786195	mCV23784230	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss131932899	ENSMUSSNP4324337	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29436118					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32199168 () rs orientation: forward

Symbol	Name	Function Class
Nprl3	nitrogen permease regulator-like 3	within coordinates
Rr349	regulatory region 349	1636 bp proximal
Rr350	regulatory region 350	within coordinates
Rr923	regulatory region 923	1641 bp proximal
Rr1084	regulatory region 1084	1284 bp proximal
Rr444549	regulatory region 444549	1728 bp distal
Rr444550	regulatory region 444550	1887 bp distal
Rr444551	regulatory region 444551	531 bp distal
Rr444552	regulatory region 444552	1156 bp proximal