rs29438110 SNP Detail

Summary

• ID
  rs29438110
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:73481618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGTGGCA TTCTAACAGA
  GTAGTTTCTT CCTACCTGTT TTGAATTAAT TTTACCACTG TTGCTCTGAG GATAAGGACA
  ATGCTCCTAC TAAGGACATA CATGCTGTTT TATTATCTCA CATGTGCCAG TGGTACATCC
  ACATGGTCTC ATAGTGACAT TGGCATTTCT CTTTTCATCA ATGCTGGAGT TAGGACTCTT
  Y
  ATCATTTTAG AGTTGCTCCT CCTCTGACCT ATTATTTCCC CTCCTCACTT TCCCTTCATC
  TGGTTCATCC TCACTTATAT GTCAGCGATA TTGATTATCA TATACTCAAC TGCATTTACT
  GTCCTCACAT ACTTACTGAG ATGTTCAGCC ATGCTCCCTA TCATCCTATA CATATCATTC
  CATGCTCTTA ATATTTGATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38799919	mCV25082570	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss132425546	ENSMUSSNP5537048	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss323746747	CHEV_11_73404294	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29438110					SNP	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73481618 () rs orientation: forward

Symbol	Name	Function Class
Or1e26	olfactory receptor family 1 subfamily E member 26	Intron