rs29439645 SNP Detail

Summary

• ID
  rs29439645
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70413543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAACAAGCA AACAAAAAAA CAAACAAACA AACAAAAACA
  AGTCAAAAGA AGCCTGGGAC ATCCGTGAAC AACAGAGTGA AGCCTGGGAC ATCCGTGAAC
  R
  ACAGAGTGAA GCCTGGGACA TTGTGAACGA CAGAGTGAAG CCTGGGACAT CGTGAACGAC
  AGAGTGCTTG CCTAACATTC CTGTACAAGG TTCTGGGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss38798791	mCV24082100	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss132372244	ENSMUSSNP6797551	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs29439645					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70413543 () rs orientation: forward

Symbol	Name	Function Class
Gltpd2	glycolipid transfer protein domain containing 2	1981 bp downstream
Rr450320	regulatory region 450320	652 bp proximal
Rr450321	regulatory region 450321	852 bp proximal