rs29440308 SNP Detail

Summary

• ID
  rs29440308
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67144084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCC CGGGAACTGG AGGAGATCAG
  Y
  GAGAGGCTGG AAGAAGCTGG CGGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss38801772	mCV22577885	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss132326583	ENSMUSSNP3978407	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29440308					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67144084 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Tssr3528	transcription start site region 3528	1475 bp upstream
Tssr3529	transcription start site region 3529	1531 bp upstream
Tssr102199	transcription start site region 102199	1523 bp downstream
Tssr102200	transcription start site region 102200	1372 bp downstream
Tssr102201	transcription start site region 102201	217 bp upstream
Tssr102202	transcription start site region 102202	739 bp upstream
Tssr102203	transcription start site region 102203	799 bp upstream
Tssr102204	transcription start site region 102204	1197 bp upstream
Tssr102205	transcription start site region 102205	1415 bp upstream
Tssr102206	transcription start site region 102206	1519 bp upstream
Tssr108532	transcription start site region 108532	1500 bp upstream
Tssr108533	transcription start site region 108533	1348 bp upstream
Tssr108534	transcription start site region 108534	654 bp upstream
Tssr108535	transcription start site region 108535	548 bp upstream
Tssr108536	transcription start site region 108536	786 bp downstream
Tssr108537	transcription start site region 108537	798 bp downstream
Tssr108538	transcription start site region 108538	1300 bp downstream
Tssr108539	transcription start site region 108539	1508 bp downstream
Tssr108540	transcription start site region 108540	1568 bp downstream