rs29441385 SNP Detail

Summary

• ID
  rs29441385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:28805705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAATAGAGG AAAATGAAAG TATGTGCTGT TTATCTTCAA
  ATGAGGATGT TTTGTTATTC AGGTTAAACT TACTGCCCTC TCAGTGAGTT AGGATTAAAT
  Y
  GTCTACTTGT ATATTCAGTA AAAGAGTTTA CTCCTTTTCT GAGAAGTTGT CCTGGAACTC
  ATTATGTAGC CCATTCTGGC CTTGAATGCA TCATCATCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss38805599	mCV24782139	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss131883426	ENSMUSSNP6319844	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29441385					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:28805705 () rs orientation: forward

Symbol	Name	Function Class
Efemp1	epidermal growth factor-containing fibulin-like extracellular matrix protein 1	within coordinates
Rr246450	regulatory region 246450	1504 bp distal
Tssr3451	transcription start site region 3451	1932 bp downstream
Tssr3452	transcription start site region 3452	1907 bp downstream
Tssr100687	transcription start site region 100687	1383 bp downstream