rs29445188 SNP Detail

Summary

• ID
  rs29445188
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70413099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGTT AAAGAGCACT GACTGCTCTT
  Y
  CGAAGGTCCT GAGTTCAAAT CCCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss38809730	mCV24082099	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss132372236	ENSMUSSNP98702	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs29445188					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70413099 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3187	CpG island 3187	1578 bp distal
Gltpd2	glycolipid transfer protein domain containing 2	1537 bp downstream
Rr450320	regulatory region 450320	1096 bp proximal
Rr450321	regulatory region 450321	1296 bp proximal