rs29447417 SNP Detail

Summary

• ID
  rs29447417
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73479385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTATTGT ATTTTGTTTT
  GTCAAGTTTG TCTGTTGTCT CTTGGTGGCC TGTTTTTTTT CCCTAAAGAA GAAATGGAGA
  GGGAACTGGT CCGGGAGAAA TGGAAATTAG GGGGTGGTTA GGGATAGTGG AAAAAGGGGA
  AAATATTGTT GGTTTGTATT GAATATGAGA AGAATCTTTT CTCAATTAAG AAATAGAATG
  Y
  AAGAAATGAA AATCTGACAC AACAGTACCT GTTATCTAAT GCTTTTTTAG AATCACCTGT
  GCAAGACAGG AGATGGCATC ACTGGCTCAC GAAGGTCACT TTACCTAACT GAGCTACTTT
  GCAAAACACA CTTTGGTAGA TGCAAACATG TAATATATCT CATTGTAGGG ATATATTGTG
  TGATATTAAT ATCAATATAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38812888	mCV25082705	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss323746740	CHEV_11_73402061	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29447417					SNP	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73479385 () rs orientation: forward

Symbol	Name	Function Class
Or1e26	olfactory receptor family 1 subfamily E member 26	239 bp downstream