rs29447419 SNP Detail

Summary

• ID
  rs29447419
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:121324889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCACTGGG ACCCAGGCAA
  GTTAACTCCT CTATACTTTA GTTTTGTCAT AGAGAAGGCA GGAGCTAATT ATAGCATCCT
  CTCAGGATAT TTGTGAATGT AGCTGACATT CACTTGTGCC CTGGCACATA CTCAAAGCTC
  AGCAATGGAT CTATCCACCC ACTAATCTTC CTAGTCCCTT TATAGTCAGC TGGGGACATT
  R
  CAGTACAAGA GAGGGACCAG CAGCTCATGG TGGGAGCTGC CATCTGAGGC AACCTCTCCT
  AAAACACTGA AGGGTTAGCA CAGGCTGTCT CTTATATCAG TCTGTGGATG TGTTCTTATA
  TGTATGTGTG TGTGTGCCCA TGCATCCATG AGCATATATG TCTGCTGCTT TCCTATCATG
  GCTGTCTGAA ATCCAGAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38812892	mCV27546124	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss132912436	ENSMUSSNP6405788	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29447419					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:121324889 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4346	CpG island 4346	744 bp proximal
Fn3k	fructosamine 3 kinase	890 bp upstream
Rr461974	regulatory region 461974	641 bp distal
Rr461975	regulatory region 461975	360 bp proximal
Tssr106404	transcription start site region 106404	885 bp upstream