rs29447810 SNP Detail

Summary

• ID
  rs29447810
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32198844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGC TGGCCTCAAA ACTCAGAGAT
  Y
  CCCACTTGCC TCTTTTTCTC AAGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38815266	mCV23784238	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss131932894	ENSMUSSNP1344385	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		C
ss323630225	CHEV_11_32148844	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29447810					SNP	T	T	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32198844 () rs orientation: forward

Symbol	Name	Function Class
Nprl3	nitrogen permease regulator-like 3	within coordinates
Rr349	regulatory region 349	1960 bp proximal
Rr350	regulatory region 350	within coordinates
Rr923	regulatory region 923	1965 bp proximal
Rr1084	regulatory region 1084	1608 bp proximal
Rr444549	regulatory region 444549	1404 bp distal
Rr444550	regulatory region 444550	1563 bp distal
Rr444551	regulatory region 444551	207 bp distal
Rr444552	regulatory region 444552	1480 bp proximal