rs29447945 SNP Detail

Summary

• ID
  rs29447945
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:98329595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGG GGAGAAGAGA CGTGGAGTGA
  K
  CTGGGGTTCC GGGGGTGGGG CCTCC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss38812416	mCV24352086	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss132704222	ENSMUSSNP3064771	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs29447945					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:98329595 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3758	CpG island 3758	within coordinates
Erbb2	erb-b2 receptor tyrosine kinase 2	1053 bp downstream
Gm12352	predicted gene 12352	within coordinates
Gm72451	predicted gene, 72451	571 bp downstream
Mien1	migration and invasion enhancer 1	within coordinates
Rr402936	regulatory region 402936	146 bp upstream
Rr456150	regulatory region 456150	722 bp distal
Rr456151	regulatory region 456151	374 bp distal
Rr456152	regulatory region 456152	130 bp proximal
Rr456153	regulatory region 456153	212 bp proximal
Rr456154	regulatory region 456154	277 bp proximal
Tssr110536	transcription start site region 110536	within coordinates
Tssr110537	transcription start site region 110537	172 bp downstream