rs29450583 SNP Detail

Summary

• ID
  rs29450583
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83336019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGCCAAGAC CCAGAACTCC CTCCCTCAGG CATCAACTCC
  AACGTTGTGG GTGTGGTCTA CTAGTTTCCA TCTGGGTTGC GGGCAGGTGA GCAAGTGACT
  W
  AACATCAGAG AGAGGAAGTA CACGGTAGAT TCCGCTAGGG GCCAAACTGC TTGAGTTCCA
  GTACTAGATT TACTTTTTAC TGTGTGACGT TGGACAGAT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38817374	mCV22343066	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss132469319	ENSMUSSNP974922	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29450583					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83336019 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3416	CpG island 3416	within coordinates
Mmp28	matrix metallopeptidase 28 (epilysin)	within coordinates
Rr452961	regulatory region 452961	28 bp proximal