rs29450851 SNP Detail

Summary

• ID
  rs29450851
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:84073236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTGTGGGGAA TGTAAGCATG CCTGCCATGT GGAGATCAGA AGACAGTCTC CTATCTGTTT
  ACTCTTATAT CATGTGAGCC TTGGGGAATG AACAGAGATC ATCATCTCAC AACAGTCCCC
  TTTACCAGCT GAGCTACCTT CTGGGATTAC AGGTGTGTGC CGCCATATTT GTTTTGTTTT
  TGACGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTATGC TCTTGTGCAA
  GCTTACACCA GGTCAGAAGA CAATTTATGA GAGTTGGGTC TCTCCTATCA TGTGGGTTCC
  W
  GGCAAAAAGT GCTGTTATGT GTTGAGCTGT CTCCTTGGCC TTCAAATCTT TTTTTTAATG
  CAGTGCTGGG GATTGAACCA GGGCTTTGTG CATGCTAAGC ATGTACGTTA CCAACTTAGC
  ATTCTCCGCC TCACTGTACC TTTCTGTGAA GAGGACCCTA TTTGTAGATG ACACAATTTT
  GGCATGTCAA AGCCTTGCTT TTTGTTTTTG TTTTGTTTTC AATTTTTAGG TAGCTAATAT
  CTTAATTATT GGATGAGCAA CCAACAATTA AAATCGTGCA GTAATACACT TAAATTTAAT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss38816048	mCV24263451	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29450851					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:84073236 () rs orientation: forward

Symbol	Name	Function Class
Acaca	acetyl-Coenzyme A carboxylase alpha	within coordinates
Cpgi3430	CpG island 3430	1902 bp distal
Rr453130	regulatory region 453130	1686 bp distal