rs29451438 SNP Detail

Summary

• ID
  rs29451438
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:58886107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCA GTGGAGCCGA GAGTGAGGGC
  R
  GACACGGAGG GAAGAACTTC CTCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38817356	mCV23838172	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss132221091	ENSMUSSNP5682075	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss323695551	CHEV_11_58808783	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29451438					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58886107 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2948	CpG island 2948	477 bp distal
Gm74293	predicted gene, 74293	within coordinates
Obscn	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	Intron
Rr448070	regulatory region 448070	737 bp proximal