rs29452773 SNP Detail

Summary

• ID
  rs29452773
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:110425135 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTT TATTCAGTGT GCGTCTGTGG
  Y
  GTGTATTCAC TTGGAGTCAT TTAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38821481	mCV25262227	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss132792017	ENSMUSSNP2904445	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss323847518	CHEV_11_110395623	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29452773					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:110425135 () rs orientation: forward

Symbol	Name	Function Class
Gm11682	predicted gene 11682	1621 bp upstream
Gm30009	predicted gene, 30009	921 bp upstream
Gm74395	predicted gene, 74395	within coordinates
Tssr105717	transcription start site region 105717	1594 bp upstream
Tssr111604	transcription start site region 111604	1034 bp upstream