rs29452988 SNP Detail

Summary

• ID
  rs29452988
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:29478846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATATTTGAT ATTCAGGATA TTTGCTATGC AACCCCCAAA
  AGGGTTGTGA CCCACAGGTT GACATCAGCT GCCCTATATG ATTAAGGTAG GACTGGAGAG
  R
  TGGCTTAGCG GTTAAGAGCA CTGACTGCTC TTCCAGAGAT CCTGAGTTCA ATTTCTAGCA
  ACCACATGGT GACTCACAAC CATCTGTAGT GGGATCCGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38819878	mCV25279094	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss323610915	CHEV_11_29428846	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29452988					SNP	A	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:29478846 () rs orientation: forward

Symbol	Name	Function Class
Mtif2	mitochondrial translational initiation factor 2	within coordinates
Rr444175	regulatory region 444175	1701 bp distal
Rr444176	regulatory region 444176	96 bp proximal