rs29455664 SNP Detail

Summary

• ID
  rs29455664
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:12503036 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  CCCAGCTGAA GAGTTCTGAA TTCACGCAGT TGAATCCTTC TCAACAGTCT GTGATGCGGG
  AACACTTTGT TACCACCGTT CCCCAGCTGA AGAGTTCTGA ATTCACGCAG TTGAATCCTT
  CTCAACAGTC TGTTTTACGG GAACCTTTAT GACCGTGACC CGCAGTTCTG GTTCCGGAAT
  GAGGAATCTT CCTTGCGCCG GTGATGGTTA ACTCCCGTCC CGAGTTTTCT TGTCCCGGGT
  TTTTTTTGTC CCGGATTTTC TCGTCCCGGA TTTCGGCACC AACTCTTACA CGCGTTCTCG
  Y
  GACCGGCCAG GAAAGACGCA ACAAACCAGA ATCTTCTGCG GCAAAACTTT ATTGCTTACA
  TCTTCAGGAG TAAGAGTGCA AGCCCCCCAT TGCTTACATC TTTAGGAGCC AGAGCGCCAG
  AGCGCCAGAG CGCAGAGCAA GAGCTCTATT GTTTACATCT TTAGGAGCAA GAGAGCAAAC
  CCCAAGCCCC AAAACGAAAA GTGAAACCCC TTCCCTCTTA AGGAGAGTTA TCCTTCGCCT
  AGGACGTATC ACTCCCTGAT TGGCTGCGGC CCATGGCCGA GTTGTAGTCA CGGGGAAGGC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38820855	mCV23563177	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29455664					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:12503036 () rs orientation: reverse

Symbol	Name	Function Class
Map3k4	mitogen-activated protein kinase kinase kinase 4	within coordinates
Rr392297	regulatory region 392297	within coordinates