rs29456943 SNP Detail

Summary

• ID
  rs29456943
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73133477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCCTCACTC TAAAGTGCTA GGACTGTAAG CCAGGGGCCA CCACACCCCA CAGTGAGGAG
  GAACATCGAT ATGCATTTAC TGGCCTTTTG TACTTCTTTG GTGGGTCTTG GTTTACGGGA
  CTATGTGCTG GCTGCTCCTG GTTTATAGAC ACCCTTGGCT TCTTAATGAA CCAGTCTTTT
  CTCTATTGCT GTGCTGCCGT GTAGTTTTTC TTCCTGTCTG TCTTTTGCCT TTTAATTTAC
  ACACAACACC CTTTACTTAT AAAAGGGTTT CATTCTGATA GGGTCAAGCT GCTTGGTGGG
  K
  TTTTTTTTTT TTTCCTTTTC CTCTCTCTTA TGGCTTCTGG ACTGGTGCCA TGCTCTGATC
  TTCATTAGAG TTAGTTACAT AGTAGCCTTT CTGTATTCCC TTTCCACTCA TTGGTAGGTG
  TTCATTTTGA CTACTTTATC TAGAGATTCC TTCTGTGTGC CAAGGATGGC ATTTTACTTA
  GTATTTCTGG CTTCAAGTGA AGGCTCAGTG ATACTGAGTA GTCCTCTCTT CTTAAAGTCA
  TACTCCAAGC TTCTGAAGTG GACTTGGGAG CTGAAATCTC TGCCGGAGGC AGGGAGAGGC
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38826582	mCV25414382	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss132423108	ENSMUSSNP344949	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29456943					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73133477 () rs orientation: forward

Symbol	Name	Function Class
Trpv1	transient receptor potential cation channel, subfamily V, member 1	within coordinates