rs29457261 SNP Detail

Summary

• ID
  rs29457261
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83299296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATT GAAATTTGAG CTTAACGCTA
  R
  CGTGCATCTC TGCTTCCAGG CTGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38826593	mCV24263085	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss132468875	ENSMUSSNP632188	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
ss323767080	CHEV_11_83221972	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29457261					SNP	G	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83299296 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3411	CpG island 3411	653 bp proximal
Gm72478	predicted gene, 72478	within coordinates
Rasl10b	RAS-like, family 10, member B	667 bp upstream
Rr452947	regulatory region 452947	577 bp proximal
Rr452948	regulatory region 452948	728 bp proximal
Rr452949	regulatory region 452949	1613 bp proximal
Rr452950	regulatory region 452950	1748 bp proximal
Tssr103692	transcription start site region 103692	746 bp upstream
Tssr103693	transcription start site region 103693	1185 bp upstream
Tssr103694	transcription start site region 103694	1250 bp upstream
Tssr103695	transcription start site region 103695	1266 bp upstream