rs29457378 SNP Detail

Summary

• ID
  rs29457378
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:28695001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAAAAGAT CAGTGGGGTC
  CAGGAGTTAC AGAGAAAGCA CTCACCATGA CTTTTTGCCT CTAAACCAAA TATCACTCAA
  ATTCTCTATT ATAGCACAAG ACTAAATACA TAAAACATTT ATATATTTCT ATTTTTTACT
  TATCTTGTCT GAATTTAAGT GTGTTTACTC TGATATCAAT AAAATGTGAA TATATATATA
  Y
  ACATACATAT ATGCCTCTTT AATAGTAGAC ATTTGAAATA AAGGACTTTA GTAAATCAAT
  GGACTGTAAG TAGTAGGTGC TGATTTAACA CTGTCTTAGT CAGGGTTTCT ATTCCTGCAC
  AAAATTCATG ACCAAGAAGC AGTTGGGGAG GAAAGGGTTT ATTTGGCTTA CAATTCCATA
  CTGCTGTTCA TCACCAAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38825302	mCV23802660	ABI	CRAMUS_MOUSE	f	SNP		T	C	T
ss131881204	ENSMUSSNP833084	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29457378					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:28695001 () rs orientation: forward

Symbol	Name	Function Class
Mir216b	microRNA 216b	1190 bp upstream
Mir216c	microRNA 216c	1197 bp downstream
Mir217hg	microRNA 217 host gene	within coordinates