rs29458575 SNP Detail

Summary

• ID
  rs29458575
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:102152590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAC CTGGGGTTAT AGATGGTTCT
  R
  TAGCACCATG TGGCTGCTGG GAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38824129	mCV22836261	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss132735296	ENSMUSSNP4083756	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss323834478	CHEV_11_102123078	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29458575					SNP	G	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:102152590 () rs orientation: forward

Symbol	Name	Function Class
Hrob	homologous recombination factor with OB-fold	within coordinates
Tssr105201	transcription start site region 105201	457 bp upstream
Tssr105202	transcription start site region 105202	476 bp upstream