rs29461193 SNP Detail

Summary

• ID
  rs29461193
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:67143336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG TTTTTTCTTG AGTATCTAGC
  W
  AAGGACATAG GGTTCAGGGT TTAAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38832581	mCV22577874	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss132326575	ENSMUSSNP6317817	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss323719218	CHEV_11_67066012	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29461193					SNP	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67143336 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	Intron
Rr449442	regulatory region 449442	1288 bp proximal
Tssr3527	transcription start site region 3527	1633 bp upstream
Tssr102189	transcription start site region 102189	1984 bp downstream
Tssr102190	transcription start site region 102190	1968 bp downstream
Tssr102191	transcription start site region 102191	1947 bp downstream
Tssr102192	transcription start site region 102192	1941 bp downstream
Tssr102193	transcription start site region 102193	1898 bp downstream
Tssr102194	transcription start site region 102194	1756 bp downstream
Tssr102195	transcription start site region 102195	1673 bp downstream
Tssr102196	transcription start site region 102196	1634 bp downstream
Tssr102197	transcription start site region 102197	1590 bp downstream
Tssr102198	transcription start site region 102198	1529 bp downstream
Tssr102199	transcription start site region 102199	775 bp downstream
Tssr102200	transcription start site region 102200	624 bp downstream
Tssr102201	transcription start site region 102201	965 bp upstream
Tssr102202	transcription start site region 102202	1487 bp upstream
Tssr102203	transcription start site region 102203	1547 bp upstream
Tssr102204	transcription start site region 102204	1945 bp upstream
Tssr108528	transcription start site region 108528	1866 bp upstream
Tssr108529	transcription start site region 108529	1552 bp upstream
Tssr108530	transcription start site region 108530	1550 bp upstream
Tssr108531	transcription start site region 108531	1522 bp upstream
Tssr108532	transcription start site region 108532	752 bp upstream
Tssr108533	transcription start site region 108533	600 bp upstream
Tssr108534	transcription start site region 108534	86 bp downstream
Tssr108535	transcription start site region 108535	182 bp downstream
Tssr108536	transcription start site region 108536	1534 bp downstream
Tssr108537	transcription start site region 108537	1546 bp downstream